Please visit:
iLINCS Workshop at LINCS Symposium Nov, 2020 and
Adverse Outcome Pathways with iLINCS - DEPHS Seminar for general workflows.
Alternatively you can go to iLINCS Video Portal for a complete set of tutorial videos.
Use case-1: Detecting and modulating mTOR pathway signaling.
Use case-2: Proteo-genomics analysis of cancer driver events in breast cancer.
Use case-3: Using iLINCS for analysis of transcriptional signature of COVID-19 infection.
Tutorial-1: iLINCS landing page Navigation.
Tutorial-2: Analyze my genes against LINCS datasets.
Tutorial-3: Analyze LINCS transcriptomic and proteomic datasets.
Tutorial-4: Analyze a drug signature and find other drugs with similar signatures.
Tutorial-5: Datasets workflow.
Tutorial-6: Signature workflow.
Tutorial-7: Genes workflow.
The iLINCS (Integrative LINCS) portal facilitates interrogation of LINCS transcriptomic and proteomic datasets with user-defined gene lists. The workflow is as follows:
Paste a list of gene IDs (Entrez Gene IDs or HGNC approved symbols) or create one from a library of gene lists.
Select a LINCS or non-LINCS dataset for analysis
Perform statistical analysis of differential gene or protein...