Analyzing genes against LINCS data

The iLINCS (Integrative LINCS) portal facilitates interrogation of LINCS transcriptomic and proteomic datasets with user-defined gene lists. The workflow is as follows:

  1. Paste a list of gene IDs (Entrez Gene IDs or HGNC approved symbols) or create one from a library of gene lists.
  2. Select a LINCS or non-LINCS dataset for analysis
  3. Perform statistical analysis of differential gene or protein expression for your submitted genes
  4. Export or further analyze these results
  5. Repeat the analysis for different sample groups on the same datasets

    or

    Repeat the analysis on a different dataset

iLINCS genes pipeline

For more, see the iLINCS video tutorial on YouTube

Category: workflows

Last updated on 15th Nov 2018